BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G06LP1|AL428958
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1471 1509 0.0
>3x_Contig1471
Length = 8032
Score = 1509 bits (760), Expect = 0.0
Identities = 765/768 (99%)
Strand = Plus / Plus
Query: 107 tatctaataagttgactactgctaccgaactgtcagatgatttggatgctgctacccagc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatctaataagttgactactgctaccgaactgtcagatgatttggatgctgctacccagc 60
Query: 167 tggcagaggctaaaaagaaagttacagcagccaatgatacacaattacagaaatatatcg 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcagaggctaaaaagaaagttacagcagccaatgatacacaattacagaaatatatcg 120
Query: 227 aagaacaagaccccatgatcaawagtttaccagaatttttgttaccaagagttaagaagg 286
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaacaagaccccatgatcaaaagtttaccagaatttttgttaccaagagttaagaagg 180
Query: 287 aattctatgaacaacaggttaggttgaacggtgggttttacgacaaaagcgtgcgcccta 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattctatgaacaacaggttaggttgaacggtgggttttacgacaaaagcgtgcgcccta 240
Query: 347 aagatcgttctttgagattaacgaatgaagaattagaagtgcttgaacctagtgtctatg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagatcgttctttgagattaacgaatgaagaattagaagtgcttgaacctagtgtctatg 300
Query: 407 ttaaatcttacagagtaaaatcatctatgaagaaggccacacagctgcttagacttttga 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaaatcttacagagtaaaatcatctatgaagaaggccacacagctgcttagacttttga 360
Query: 467 acggattggacgctaagaaagctttgactcaatgtcatttctccgataaahaggttgccc 526
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 361 acggattggacgctaagaaagctttgactcaatgtcatttctccgataaaaaggttgccc 420
Query: 527 gtgatgttgccgaattattggagcgcggtattaatgatggtgtgaagcttggcttggatg 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgatgttgccgaattattggagcgcggtattaatgatggtgtgaagcttggcttggatg 480
Query: 587 ccaatgacctatacatctcccagatatggaccggcagtgatggattttggcaaaaacgtg 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaatgacctatacatctcccagatatggaccggcagtgatggattttggcaaaaacgtg 540
Query: 647 tcgaatggaagggtagaggtagacgtggtctcattgaacacccatatgtgcatatcaaat 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgaatggaagggtagaggtagacgtggtctcattgaacacccatatgtgcatatcaaat 600
Query: 707 gcatattgaagaccaagagtgtaaggaagagaagactagagcacgaagccaaactaaaag 766
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 601 gcatattgaagaccaagagtgtaaagaagagaagactagagcacgaagccaaactaaaag 660
Query: 767 aacaaaggaagaaaccgtgggttcaattagcagataaacccatcagaggttctatgggtg 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aacaaaggaagaaaccgtgggttcaattagcagataaacccatcagaggttctatgggtg 720
Query: 827 gtgtttacaaatggtaatgagatattaaacattatcatattacgttta 874
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgtttacaaatggtaatgagatattaaacattatcatattacgttta 768
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6007
Number of Sequences: 1807
Number of extensions: 6007
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)